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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905858.1_cds_XP_016456113.1_49982
CDS Infomation

[gene=LOC107780103] [db_xref=GeneID:107780103] [protein=vacuolar cation/proton exchanger 2-like isoform X2] [protein_id=XP_016456113.1] [location=join(65342..65561,66948..67144,67360..67572,67797..67931,69328..69444,69515..69568,69808..69924,70075..70168,70608..70618)] [gbkey=CDS]
Sequence

ATGCTTTCATTTGGTGATTCTCTTCAACGAGCTAAGGTGGTGGAGAAGAGAAAGAGACGA
TTAATTGAAGACATCTTAAAGGGAAAGTGCTTCAGTTTCAGAACATGGAAGAAAATTGAA
GCTGCTGCTCAGTTTTTAGAAGCAGGGAATTTTAATACACAATTCAGCAATCAGAGAGCA
CATGCTACACCAATGCTGGTCAGGGGAAGGGAGCAGATAGTTGGGGGCCTTCTGAATGCT
ACATTTGGCAATGCAACTGAAATGATTATCTCATTATATGCACTGAACAATGGAATGATG
CGGGTTGTTAAACAGTCCTTGTTGGGTTCTATTTTATCGAATATGCTCTTGGTGCTTGGC
TGTGCCTTCTTGAGTGGTGGGATTATTCATCACCAGAAAGTCCAGGTGTTCAGTAAGGCA
ACTGCCATTGTGAACTCAGGATTATTGTTGATGGCAGTCATGGGCTTACTGTTTCCAGCT
GTACTTCATTTCACCCACACGGAAGTGCATTTTGGCAAGTCACAGTTGGCTCTTTCAAGA
TTTAGCAGTTGCATAATGCTGATAGCATATGCAAGTTACCTGTTCTTTCAGCTCAAGAGT
CAACCAAATCTGTATAGCTCTGTGGGCGAGGATATAGAAAATAATTCAGAAAATTCTGAA
GAAGAAGAGGCACCTGAGATAACCCAGTGGGAAGCTATAGGGTGGCTTGCTGTTTTGACA
ATATGGATATCGGTGCTGTCTGGATATCTTGTAGATGCCATCGAGGGTGCATCTGACTCG
TTGAACATGCCCATGTCCTTTATTAGTGTCATCTTGCTTCCAATTGTAGGAAATGCGGCA
GAACACGCCAGTGCAATCATGTTTGCGATGAAAGATAAGCTTGACATCACACTTGGAGTT
GCAATTGGGTCATCTACTCAGATATCAATGTTTGTGATACCGTTTTGTGTTATCGTTGGT
TGGTTTATGGGAAAGCCCATGGACTTGAATTTCCAATTATTTGAGACTGCTACACTCTTC
ATCACAGTGCTAGTCGTGGCATTCATGCTGCAGGAAGGTACATCAAACTATTTTAAAGGA
TTGATGCTGATCCTTTGCTATCTGATTGTTGCTGCAAGTTTCTTTGTACATGTCGATCCA
TCCAAAGATGGAGACTAA

Peptide Sequence

PEP ID

XP_016456113.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 2-like isoform X2 [Nicotiana tabacum]
Sequence

MLSFGDSLQRAKVVEKRKRRLIEDILKGKCFSFRTWKKIEAAAQFLEAGNFNTQFSNQRA
HATPMLVRGREQIVGGLLNATFGNATEMIISLYALNNGMMRVVKQSLLGSILSNMLLVLG
CAFLSGGIIHHQKVQVFSKATAIVNSGLLLMAVMGLLFPAVLHFTHTEVHFGKSQLALSR
FSSCIMLIAYASYLFFQLKSQPNLYSSVGEDIENNSENSEEEEAPEITQWEAIGWLAVLT
IWISVLSGYLVDAIEGASDSLNMPMSFISVILLPIVGNAAEHASAIMFAMKDKLDITLGV
AIGSSTQISMFVIPFCVIVGWFMGKPMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKG
LMLILCYLIVAASFFVHVDPSKDGD

Transcript Sequence

Gene sequence data has not been registered.